A scalable, reproducible snakemake pipeline to analyse Illumina amplicon sequencing data.
Builds a webpage to conveniently explore the results
🌍 The malaria vector selection atlas 🌍
A web resource of selection signals in An. gambiae s.l mosquitoes from phase 3 of the Anopheles 1000 genomes project
🦕 RNA-Seq-Pop 🦕
A reproducible snakemake pipeline to analyse RNA-Seq data from any organism. Calls variants
and performs population genomic analyses as well as typical transcriptomic analyses
🦟 malariagen_data 🦟
A python package to access and analyse data from the Anopheles 1000 genomes project in the cloud
🌺 AnoExpress 🌺
A python package to load and explore data from a meta-analysis of transcriptomic studies into insecticide
resistance in Anopheles mosquitoes
🧬 AnoPrimer 🧬
A python package to design primers in Anopheles gambiae and funestus whilst considering genetic variation.
🦴 ancIBD 🦴
A python package to identify segments of identity by descent in ancient DNA